Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCCACAGCTGGGTGCCAGGG
.((((((((.((.(((.((...&)).)))..)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006184
GeneSymbolNUCB1
Binding site1974,1994
Score0.923
Seed1
Au0.382
Energy-19.1
Binding len20
Me-6.325
Phylopstem-0.461384
Phylopflank-0.250093104875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure