Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGTGAGGGGAAGGCTTCCTCTCCTTTGGAGGGA
...((((.(((((((((((((&))).....)))))))))...........).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006192
GeneSymbolPAX1
Binding site5198,5233
Score0.808
Seed0
Au0.441
Energy-23.4
Binding len35
Me-8.828
Phylopstem-0.33826665517241383
Phylopflank0.027275800000000044
Longest consecutive pairings9
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure