Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGGAGGGTGAGGCAGGGCAGGGACAGTCTCCAGGGTCA
.(((((((((.((((((((..&)))))))).)).....................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006201
GeneSymbolCDK16
Binding site2948,2988
Score0.846
Seed1
Au0.338
Energy-27.5
Binding len40
Me-6.618
Phylopstem1.530029033333333
Phylopflank0.7860692862499998
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end6
Position3UTR
2D Structure