Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGTAGCAACTGCAGTCAAGCGAG
((((.(((((((((((.....&.)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369535
GeneSymbolNTRK2
Binding site4373,4398
Score0.846
Seed0
Au0.559
Energy-21.1
Binding len20
Me-8.057
Phylopstem0.29865420000000004
Phylopflank0.7551608962499998
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end3
Position3UTR
2D Structure