Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTATAGAATATGCTGGGC
.(((((((((...((((((((.&))))))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006239
GeneSymbolPPEF2
Binding site426,447
Score0.846
Seed1
Au0.5
Energy-19.5
Binding len21
Me-11.254
Phylopstem-0.045712
Phylopflank-0.19616905499999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure