Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATTGGCCAA
...((((...(((((((((...&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006240
GeneSymbolPPEF1
Binding site295,309
Score0.846
Seed0
Au0.559
Energy-16.3
Binding len14
Me-11.127
Phylopstem0.472538
Phylopflank0.7592103486249999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure