Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTTACATTGAATTAATGCTTGGTA
(((.(((((.((((((((((..&)))))))))).....))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006251
GeneSymbolPRKAA1
Binding site4920,4945
Score0.846
Seed0
Au0.559
Energy-16.4
Binding len25
Me-8.212
Phylopstem5.871819500000001
Phylopflank4.892364448125001
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end6
Position3UTR
2D Structure