Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGATTATTTGGGGGTTTT
(((((((.......(((((((&))))))).......))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006260
GeneSymbolDNAJC3
Binding site5196,5218
Score0.923
Seed1
Au0.662
Energy-22.2
Binding len22
Me-16.868
Phylopstem0.5875152857142857
Phylopflank0.8928479830249998
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure