Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTCGTTTACATTGCCTGCCAAGGA
.(((((((..((((((((((..&.))))))))))..))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006264
GeneSymbolPTPN13
Binding site7248,7275
Score0.885
Seed1
Au0.515
Energy-20.9
Binding len22
Me-6.092
Phylopstem2.8798469600000005
Phylopflank4.966778411249999
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure