Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCCAAGTAGTGAAAGAGCCACACCTGCCTTTCATCCTGTATGTCAGGTG
((((((((((((..........&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006277
GeneSymbolITSN2
Binding site3610,3662
Score1.0
Seed1
Au0.574
Energy-19.1
Binding len14
Me-7.052
Phylopstem0.05296177249999998
Phylopflank1.5034496049999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure