Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCATTGCAATGAGACCCCCAGGG
.((((((((.((((((((((((&))))))))))))..)))......))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001331125
GeneSymbolPLAC9
Binding site583,612
Score1.0
Seed1
Au0.618
Energy-20.7
Binding len29
Me-5.036
Phylopstem0.21979550916666668
Phylopflank-0.16558129725000004
Longest consecutive pairings12
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure