Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GCGACGAGGAGGTGGTGGTGG
(((((((((((((.((.(((.&)))))..))))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_006295
GeneSymbolVARS1
Binding site1819,1840
Score0.808
Seed1
Au0.426
Energy-18.2
Binding len21
Me-4.794
Phylopstem4.27248176923077
Phylopflank2.9201683575000006
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure