Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGAGCTGTGGATTTCTGCAT
.(((((((((((((.((((((&)))))).))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369540
GeneSymbolNTRK2
Binding site3088,3113
Score0.923
Seed1
Au0.426
Energy-23.5
Binding len25
Me-4.529
Phylopstem0.3447302823529412
Phylopflank0.36345731000000003
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure