Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTATGTTCACATGCCTGTAGTACCTGCAAACCATGCCAGGTT
(((((((((....(((((....&.)))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001369541
GeneSymbolNTRK2
Binding site6574,6620
Score0.846
Seed1
Au0.559
Energy-20.6
Binding len20
Me-12.641
Phylopstem-0.569362311111111
Phylopflank-0.30778489
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure