Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCTTGTGGCCAGGC
.((((((.(((((.(((.....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006315
GeneSymbolPCGF3
Binding site4126,4141
Score0.846
Seed1
Au0.294
Energy-17.8
Binding len15
Me-6.964
Phylopstem0.38431499
Phylopflank-0.3752118619999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure