Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGAGCTGTGGATTTCTGCAT
.(((((((((((((.((((((&)))))).))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369541
GeneSymbolNTRK2
Binding site3419,3444
Score1.0
Seed1
Au0.426
Energy-23.5
Binding len25
Me-4.529
Phylopstem1.0650909529411763
Phylopflank0.6108206474999999
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure