Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTCAAGGTCTTGCCAGGTC
((((((((.((..((.(((((.&)))))))..))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006331
GeneSymbolEMG1
Binding site4788,4810
Score0.846
Seed1
Au0.485
Energy-19.4
Binding len22
Me-9.863
Phylopstem-0.41772431299999996
Phylopflank-0.3774419857
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure