Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTTGGGCTCTCGCTGGTGGCTGGAACAGCCAGATGTGTTGCCAGGG
.(((((((((((..........&.))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006361
GeneSymbolHOXB13
Binding site665,714
Score0.846
Seed1
Au0.426
Energy-17.0
Binding len14
Me-6.908
Phylopstem-0.9351425833333332
Phylopflank-0.15121026499999998
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure