Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATTCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGGG
.((((((((((...........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006369
GeneSymbolLRRC41
Binding site1953,2004
Score0.846
Seed1
Au0.368
Energy-19.8
Binding len12
Me-10.255
Phylopstem2.32222316
Phylopflank2.6843180800000006
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure