Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGGATGCACTGTATAGCCAGGC
.(((((((((((.((((..(((&)))..)))).))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006370
GeneSymbolVTI1B
Binding site946,969
Score0.846
Seed1
Au0.485
Energy-19.9
Binding len23
Me-5.082
Phylopstem2.976653575
Phylopflank2.7990646787499998
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure