Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACTGCCAGGTT
((((((((......((((((..&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006370
GeneSymbolVTI1B
Binding site1420,1435
Score1.0
Seed1
Au0.5
Energy-17.8
Binding len15
Me-14.554
Phylopstem0.214809375
Phylopflank0.18167473674999993
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure