Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAAACCATGCCAGGTT
(((((((((....(((((....&)))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001369545
GeneSymbolNTRK2
Binding site6522,6541
Score0.923
Seed1
Au0.559
Energy-20.2
Binding len19
Me-12.641
Phylopstem-0.2833783555555555
Phylopflank-0.35554397625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure