Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGAGATGGAGCAGGGA
...((((((..((((((((((&)))))))))..)..)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006373
GeneSymbolVAT1
Binding site2409,2430
Score0.846
Seed0
Au0.456
Energy-27.8
Binding len21
Me-10.582
Phylopstem2.58268575
Phylopflank3.8132957225
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure