Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATGGATTTGTGGCCAGGG
.((((((.(((((.........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006411
GeneSymbolAGPAT1
Binding site278,298
Score0.846
Seed1
Au0.412
Energy-16.5
Binding len13
Me-7.932
Phylopstem-0.049133833333333356
Phylopflank0.4224255212499999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure