Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTAGAATATGGAGCTAGA
..((((((((.(((((((....&)))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001331190
GeneSymbolCMC1
Binding site4609,4628
Score0.808
Seed1
Au0.647
Energy-20.0
Binding len19
Me-7.782
Phylopstem0.62903905
Phylopflank0.29228851625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure