Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTATGTTCACATGCCTGTAGTACCTGCAAACCATGCCAGGTT
(((((((((....(((((....&.)))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001369550
GeneSymbolNTRK2
Binding site5639,5685
Score0.923
Seed1
Au0.559
Energy-20.6
Binding len20
Me-12.641
Phylopstem-0.3548740888888889
Phylopflank-0.64610850625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure