Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTTATGGACTTATGTCAGGTG
((((((((((((((((......&))))))).........))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006445
GeneSymbolPRPF8
Binding site4861,4887
Score0.846
Seed1
Au0.588
Energy-18.3
Binding len26
Me-3.938
Phylopstem5.893988411999999
Phylopflank5.524172144625002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure