Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GCGTACCTCCTATTTTATGAGAGAATACTGTAATAATA
.((((((((....(((((((.&)))))))......................)))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_006447
GeneSymbolUSP16
Binding site2590,2628
Score0.923
Seed1
Au0.691
Energy-16.2
Binding len38
Me-12.497
Phylopstem2.096012125
Phylopflank2.3618576949999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure