Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGTCCAGTATGCCGGC
..(((((((((...........&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006458
GeneSymbolTRIM3
Binding site526,543
Score0.846
Seed1
Au0.353
Energy-15.0
Binding len11
Me-11.418
Phylopstem6.2918400000000005
Phylopflank5.26864544
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure