Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTTTGGAAGGCGGCGTTGCCATGCCAGGTG
(((((((((.((((((......&.))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006474
GeneSymbolPDPN
Binding site306,338
Score0.923
Seed1
Au0.426
Energy-21.6
Binding len19
Me-5.18
Phylopstem-0.3876503888888889
Phylopflank0.1920793587499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure