Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGCTGAGGCAGGA
....(((((((((.(((((..&)))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006493
GeneSymbolCLN5
Binding site3964,3982
Score0.846
Seed0
Au0.456
Energy-22.8
Binding len18
Me-10.403
Phylopstem0.22750825
Phylopflank-0.35617913301250004
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure