Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCATGCTATGTATGTACCAGGTT
((((((((((((..((((((((&))))).)))..))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006536
GeneSymbolCLCA2
Binding site2194,2220
Score0.923
Seed1
Au0.603
Energy-19.7
Binding len26
Me-6.084
Phylopstem2.8180570714285715
Phylopflank0.9342286274999998
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure