Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTCCCCAACGGCTCCCCGTCGTCCTGGTGCTGCAGCGTGTGCCGGT
..(((((((((..((((((((.&.))).)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006537
GeneSymbolUSP3
Binding site198,247
Score0.923
Seed1
Au0.382
Energy-20.9
Binding len22
Me-9.593
Phylopstem2.6528894444444444
Phylopflank3.6429439625000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure