Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTACTCATTGGATTGCCGGGG
.(((((((..(((((.((....&.)))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006595
GeneSymbolAPI5
Binding site1752,1777
Score1.0
Seed1
Au0.603
Energy-19.3
Binding len19
Me-6.325
Phylopstem3.1231028571428574
Phylopflank2.1767073082499997
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end3
Position3UTR
2D Structure