Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCACTTTTGACATTGATGCCAATGGTA
(((((((((.((((((......&.))))))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006597
GeneSymbolHSPA8
Binding site1501,1531
Score0.923
Seed1
Au0.588
Energy-17.9
Binding len19
Me-5.18
Phylopstem5.326650636363636
Phylopflank5.5918276575
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure