Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTACGTTGATAAGGAAATTGGAGAACCAGGC
.(((((....(((((((((((.&))))))))))).................))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006607
GeneSymbolPTTG2
Binding site48,82
Score0.846
Seed0
Au0.5
Energy-17.3
Binding len34
Me-9.95
Phylopstem0.6907505454545454
Phylopflank0.24144494473684214
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure