Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTAATGCCAGGTT
((((((((((((..........&)))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006620
GeneSymbolHBS1L
Binding site4055,4069
Score0.923
Seed1
Au0.588
Energy-17.2
Binding len14
Me-7.052
Phylopstem-0.2299563153846154
Phylopflank0.03171137874999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure