Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGTCCAGCCAGGTT
(((((((......(((((....&))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006627
GeneSymbolPOP4
Binding site1114,1132
Score0.923
Seed1
Au0.471
Energy-17.8
Binding len18
Me-16.011
Phylopstem-0.5627827142857142
Phylopflank-0.5838228825
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure