Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCTCATTCGTATGCTAGGTT
((((((((((((((((((((((&))))))))..))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006642
GeneSymbolSDCCAG8
Binding site2519,2545
Score0.846
Seed1
Au0.735
Energy-23.7
Binding len26
Me-3.938
Phylopstem0.24455258479999994
Phylopflank1.0539442042500002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure