Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGG
.(((((((((............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006644
GeneSymbolHSPH1
Binding site3927,3937
Score1.0
Seed1
Au0.647
Energy-16.2
Binding len10
Me-13.079
Phylopstem1.3982791555555556
Phylopflank3.2668855674999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure