Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTTAACTCTGTATGCCAT
...(((((((((..((((((((&))))))).)..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006665
GeneSymbolHPSE
Binding site1480,1501
Score0.808
Seed0
Au0.618
Energy-16.9
Binding len21
Me-8.661
Phylopstem0.04142450000000001
Phylopflank0.1531793925
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure