Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCCTTGTGTGCCGA
...((((((((((.(.(((...&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006700
GeneSymbolTRAFD1
Binding site1508,1524
Score0.923
Seed0
Au0.382
Energy-16.2
Binding len16
Me-7.604
Phylopstem-0.023789769000000006
Phylopflank0.42131111637499985
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure