Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTTGGGTTTGAGGGAAGGGAGCAGGGTG
..(((((((..(((((((...&.)))))))..))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006700
GeneSymbolTRAFD1
Binding site1982,2012
Score0.846
Seed1
Au0.397
Energy-30.1
Binding len18
Me-9.024
Phylopstem0.7870025571428572
Phylopflank1.0604499812500001
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure