Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTCCCGCGGCCGCGCTCAGACAACAAAAGCGGAAGATGCTGCAGT
((((((((((((((((((((.&)))).....))))))))).......................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001332
GeneSymbolCTNND2
Binding site457,506
Score1.0
Seed1
Au0.397
Energy-22.7
Binding len49
Me-3.938
Phylopstem1.514886091666667
Phylopflank1.6821430075000001
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end7
Position5UTR
2D Structure