Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGGATGCCGGGTT
((((((((..((..........&))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006736
GeneSymbolDNAJB2
Binding site2176,2189
Score0.846
Seed1
Au0.426
Energy-15.8
Binding len13
Me-9.351
Phylopstem1.33982725
Phylopflank1.52157303875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure