Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTACTGCCTGCTGGCCAGGC
.((((((...((..((((((((&))))))))....))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006738
GeneSymbolAKAP13
Binding site12569,12593
Score0.923
Seed1
Au0.559
Energy-19.6
Binding len24
Me-10.552
Phylopstem0.679
Phylopflank1.26665
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure