Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGGGCATCCTGTACTGCCGGGC
.(((((((((((((((......&.))))..)))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006747
GeneSymbolSIPA1
Binding site1173,1198
Score0.846
Seed1
Au0.353
Energy-18.0
Binding len20
Me-3.793
Phylopstem4.2823995833333335
Phylopflank4.33093818875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure