Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTACAGTGGGCCAAGGC
.((((((.(((..(((((((((&)))))))))))).)))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006785
GeneSymbolMALT1
Binding site1906,1927
Score0.846
Seed1
Au0.544
Energy-19.0
Binding len21
Me-10.743
Phylopstem3.3604973333333334
Phylopflank3.699496574999999
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure