Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGCTGAGGCAGGA
....(((((((((((((....&))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006785
GeneSymbolMALT1
Binding site6153,6170
Score0.923
Seed0
Au0.5
Energy-22.4
Binding len17
Me-9.547
Phylopstem0.199220925
Phylopflank-0.026026945000000013
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure