Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTTCTTCAATATCTTGGTGCCGGGA
.((((((((.(((.(((.....&.))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006812
GeneSymbolOS9
Binding site1888,1917
Score0.923
Seed1
Au0.456
Energy-15.8
Binding len17
Me-5.893
Phylopstem2.7148048749999996
Phylopflank2.652368053749999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure